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Supported Applications

PyEM

  • Description

    a set of Python modules and command-line utilities for electron microscopy of biological samples.

  • Usage

    To list all executables provided by PyEM, run: $ sbgrid-list pyem Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install pyem Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    D. Asarnow, E. Palovcak, and Y. Cheng. 2019. UCSF pyem v0.5. Zenodo https://doi.org/10.5281/zenodo.3576630.


    • *Full citation information available through

  • Citation Note

    Please cite the following url:   https://github.com/asarnow/pyem

  • Keywords

    Electron Microscopy, Python Module

  • Default Versions

    Linux 64:  0.63 (2.5 GB)
    OS X INTEL:  20231010 (1.6 GB)

  • Other Versions

      Linux 64:

      0.4 (1022.5 MB) , 0.5 (690.9 MB) , 20210211 (1.1 GB) , 20220107 (1.9 GB) , 20220131 (1.9 GB) , 20220427 (720.2 MB) , 20221207 (2.2 GB) , 20231010 (1.7 GB)

    • OS X INTEL:

      0.4 (975.5 MB) , 0.5 (1.0 GB) , 20210211 (1.0 GB) , 20220107 (1.3 GB) , 20220131 (1.3 GB) , 20220427 (1.3 GB) , 20221207 (609.1 MB)

  • Developers

    Daniel Asarnow

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