Search
Bluesky

SBGridTV
Button for mobile navigation
Join us

Supported Applications

prodigy-lig

  • Description

    PRODIGY-LIG (PROtein binDIng enerGY prediction - LIGands) is a structure-based method for the prediction of binding affinity in protein-small ligand (such as drugs or metabolites) complexes.

  • Usage

    To list all executables provided by prodigy-lig, run: $ sbgrid-list prodigy-lig Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install prodigy-lig Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    A. Vangone, J. Schaarschmidt, P. Koukos, C. Geng, N. Citro, M. E. Trellet, L. C. Xue, and B. AMJJ. 2019. Large-scale prediction of binding affinity in protein-small ligand complexes: the PRODIGY-LIG web server. Bioinformatics (Oxford, England). 35(9): 1585-1587.


    • *Full citation information available through

  • Keywords

    Computational Chemistry

  • Default Versions

    Linux 64:  1.1.3 (247.3 MB)
    OS X INTEL:  1.1.3 (209.9 MB)

  • Developers

    Nevia Citro, Li Xue, Anna Vangone, Joerg Schaarschmidt, Alexandre MJJ Bonvin, Panagiotis Koukos, Cunliang Geng, Mikael Trellet

Scroll