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Supported Applications

PRODIGY

  • Description

    (PROtein binDIng enerGY prediction for Binding Affinity Prediction)- a collection of web services focused on the prediction of binding affinity in biological complexes as well as the identification of biological interfaces from crystallographic one.

  • Usage

    To list all executables provided by PRODIGY, run: $ sbgrid-list prodigy Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install prodigy Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    L. C. Xue, J. P. Rodrigues, P. L. Kastritis, A. M. Bonvin, and A. Vangone. 2016. PRODIGY: a web server for predicting the binding affinity of protein-protein complexes. Bioinformatics (Oxford, England). 32(23): 3676-3678.


    • *Full citation information available through

  • Keywords

    Computational Chemistry

  • Default Versions

    Linux 64:  2.3.0 (248.3 MB)
    OS X INTEL:  2.3.0 (210.8 MB)

  • Developers

    Alexandre MJJ Bonvin, Panagiotis L. Kastritis, Anna Vangone, João Rodrigues, Li Xue

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