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Supported Applications

PottsMPNN

  • Description

    is a protein design model for generating sequences from protein structures and predicting the energetic effects of mutations. It supports sequence optimization for stability and binding affinity, deep mutational scanning, and common ProteinMPNN-style design constraints.

  • Usage

    To list all executables provided by PottsMPNN, run: $ sbgrid-list pottsmpnn Copy to clipboard
  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install pottsmpnn Copy to clipboard Available operating systems: Linux 64
  • Citation Note

    Please cite this URL: https://github.com/KeatingLab/PottsMPNN

  • Keywords

    Computational Chemistry

  • Default Versions

    Linux 64:  1.1.0 (10.3 GB)

  • Developers

    Amy E Keating, Foster Birnbaum

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