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Supported Applications

PolNet

  • Description

    a Python package for generating synthetic datasets of the cellular context for Cryo-Electron Tomography.

  • Usage

    To list all executables provided by PolNet, run: $ sbgrid-list polnet Copy to clipboard

  • Usage Notes

    jupyter.polnet notebook /path/to/notebook

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install polnet Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    A. Martinez-Sanchez, L. Lamm, M. Jasnin, and H. Phelippeau. 2024. Simulating the Cellular Context in Synthetic Datasets for Cryo-Electron Tomography. IEEE transactions on medical imaging. 43(11): 3742-3754.


    • *Full citation information available through

  • Keywords

    Electron Microscopy, Tomography

  • Default Versions

    Linux 64:  1.0.0 (1.6 GB)

  • Developers

    Harold Phelippeau, Lorenz Lamm, Antonio Martinez-Sanchez, Marion Jasnin, Francisco Aguilar Martinez

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