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outlierremoval

  • Description

    Implementation of outlier removal in cryo-electron microscopy (cryo-EM) datasets using radial profiles. The method focuses on removing outliers to enhance the quality of the 2D class averages and downstream analysis.

  • Usage

    To list all executables provided by outlierremoval, run: $ sbgrid-list outlierremoval Copy to clipboard

  • Usage Notes

    Call program in SBGrid: outlierremoval Example: outlierremoval --dataset_name "10028" --extraction_size 360 --outlier_removal

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install outlierremoval Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    L. Kapnulin, A. Heimowitz, and N. Sharon. 2025. Outlier removal in cryo-EM via radial profiles. Journal of structural biology. 217(1): 108172.


    • *Full citation information available through

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