Supported Applications
MiLoPYP
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Description
a self-supervised molecular pattern mining and particle localization in situ.
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Usage
To list all executables provided by MiLoPYP, run:$ sbgrid-list milopyp
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Usage Notes
SBGrid MiloPYP provides an aliased python: python.milopyp
Use this python to call MiloPYP python scripts, e.g.: python.milopyp /programs//x86_64-linux/milopyp/0.5.0/cet_pick/cet_pick/simsiam_main.py
See a full example on the SBGrid wiki examples page: https://sbgrid.org/wiki/examples/milopyp
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install milopyp
Available operating systems: Linux 64 -
Primary Citation*
Q. Huang, Y. Zhou, and A. Bartesaghi. 2024. MiLoPYP: self-supervised molecular pattern mining and particle localization in situ. Nature methods. 21(10): 1863-1872.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  0.5.0 (6.4 GB)
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Developers
Ye Zhou, Qinwen Huang, Alberto Bartesaghi