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MiLoPYP

  • Description

    a self-supervised molecular pattern mining and particle localization in situ.

  • Usage

    To list all executables provided by MiLoPYP, run: $ sbgrid-list milopyp Copy to clipboard

  • Usage Notes

    SBGrid MiloPYP provides an aliased python: python.milopyp

    Use this python to call MiloPYP python scripts, e.g.: python.milopyp /programs//x86_64-linux/milopyp/0.5.0/cet_pick/cet_pick/simsiam_main.py

    See a full example on the SBGrid wiki examples page: https://sbgrid.org/wiki/examples/milopyp

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install milopyp Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    Q. Huang, Y. Zhou, and A. Bartesaghi. 2024. MiLoPYP: self-supervised molecular pattern mining and particle localization in situ. Nature methods. 21(10): 1863-1872.


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  0.5.0_cu11.8 (8.5 GB)

  • Other Versions

      Linux 64:

      0.5.0 (6.4 GB)

  • Developers

    Ye Zhou, Qinwen Huang, Alberto Bartesaghi

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