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Supported Applications

HHsuite

  • Description

    an open-source software package for sensitive protein sequence searching based on the pairwise alignment of hidden Markov models (HMMs).

  • Primary Citation*

    M. Remmert, A. Biegert, A. Hauser, and J. Söding. 2012. HHblits: lightning-fast iterative protein sequence searching by HMM-HMM alignment. Nature Methods. 9: 173-175.


    • *Full citation information available through

  • Citation Note

    Please cite the following url:   https://github.com/soedinglab/hh-suite

  • Default Versions

    Linux 64:  3.0.3
    OS X INTEL:  3.0.3

  • Other Available Versions

      Linux 64:

      3.0.0
    • OS X INTEL:

      3.0.0
  • Developers

    Johannes Soeding, Martin Steinegger.
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