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HAX

  • Description

    This package includes several tools to study conformational heterogeneity from CryoEM data.

    Heterogeneity analysis programs Zernike3Deep: Semi-classical neural network to analyze continuous heterogeneity with the Zernike3D basis HetSIREN: Neural network heterogeneous reconstruction for real space ReconSIREN: Neural network for ab initio reconstruction and global angular assignment

  • Usage

    To list all executables provided by HAX, run: $ sbgrid-list hax Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install hax Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    D. Herreros, R. R. Lederman, J. M. Krieger, A. Jiménez-Moreno, M. Martínez, D. Myška, D. Strelak, J. Filipovic, C. O. S. Sorzano, and J. M. Carazo. 2023. Estimating conformational landscapes from Cryo-EM particles by 3D Zernike polynomials. Nature communications. 14(1): 154.


    • *Full citation information available through

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