Supported Applications
GAPSTOP(TM)
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Description
is GPU-Accelerated Python STOPgap for Template Matching for fast template matching (TM) in cryo electron tomograms that is based on TM routines from STOPGAP.
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Usage
To list all executables provided by GAPSTOP(TM), run:$ sbgrid-list gapstoptm
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install gapstoptm
Available operating systems: Linux 64 -
Primary Citation*
W. Wan, S. Khavnekar, and J. Wagner. 2024. STOPGAP: an open-source package for template matching, subtomogram alignment and classification. Acta crystallographica. Section D, Structural biology. 80: 336-349.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  0.3 (5.6 GB)
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Developers
Beata Turoňová, Sebastian Kehl