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Supported Applications

fpocket

  • Description

    an open source protein pocket (cavity) detection algorithm based on Voronoi tessellation. It was developed in the C programming language and is currently available as command line driven program.

  • Usage

    To list all executables provided by fpocket, run: $ sbgrid-list fpocket Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install fpocket Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    V. Le-Guilloux, P. Schmidtke, and P. Tuffery. 2009. Fpocket: An open source platform for ligand pocket detection. BMC Bioinformatics. 10.


    • *Full citation information available through

  • Keywords

    Analysis

  • Default Versions

    Linux 64:  4.2.2 (11.2 MB)
    OS X INTEL:  4.2.2 (17.4 MB)

  • Other Versions

      Linux 64:

      2.0 (29.5 MB) , 4.2 (1.3 GB) , 4.2.1 (682.5 MB)

    • OS X INTEL:

      2.0 (27.0 MB) , 4.2.1 (539.3 MB)

  • Developers

    Pierre Tuffery, Vincent Le Guilloux, Peter Schmidtke

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