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Supported Applications

EMPOT

  • Description

    an algorithm designed for solving the partial alignment of cryo-EM density maps.

  • Usage

    To list all executables provided by EMPOT, run: $ sbgrid-list empot Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install empot Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    A. T. Riahi, C. Zhang, J. Chen, A. Condon, and K. D. Duc. 2025. EMPOT: partial alignment of density maps and rigid body fitting using unbalanced Gromov-Wasserstein divergence. PRX Life. American Physical Society. 3(2): 023003.


    • *Full citation information available through

  • Keywords

    Electron Microscopy, Protein Structure Analysis

  • Default Versions

    Linux 64:  fbb781d (2.3 GB)
    OS X INTEL:  fbb781d (1.9 GB)

  • Developers

    Khanh Dao Duc, Aryan Tajmir Riahi, Frédéric Poitevin, Anne Condon, Geoffrey Woollard

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