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CryoTransformer

  • Description

    a powerful and accurate particle-picking framework using Residual Network (ResNet) and Transformer.

  • Usage

    To list all executables provided by CryoTransformer, run: $ sbgrid-list cryotransformer Copy to clipboard

  • Usage Notes

    Use cryotransformer.predict.py to run python predict.py

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cryotransformer Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    A. Dhakal, R. Gyawali, L. Wang, and J. Cheng. 2024. CryoTransformer: a transformer model for picking protein particles from cryo-EM micrographs. Bioinformatics. 40(3).


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.0.0 (0 bytes)

  • Developers

    Jianlin Cheng, Rajan Gyawali, Liguo Wang, Ashwin Dhakal

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