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CryoSegNet

  • Description

    a tool for accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and specialized U-Net

  • Usage

    To list all executables provided by CryoSegNet, run: $ sbgrid-list cryosegnet Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cryosegnet Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    R. Gyawali, A. Dhakal, and L. W. &. J. Cheng. 2024. CryoSegNet: accurate cryo-EM protein particle picking by integrating the foundational AI image segmentation model and attention-gated U-Net. Briefings in Bioinformatics. Oxford Academic. 25(4).


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  1.0.0 (6.8 GB)

  • Developers

    Jianlin Cheng, Rajan Gyawali, Liguo Wang, Ashwin Dhakal

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