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cryoCARE

  • Description

    PIP package memory efficient implementation of cryoCARE (Content-Aware Image Restoration for Cryo-Transmission Electron Microscopy Data), is a restoration method that dramatically increases contrast in cryo-TEM images, improving the interpretability of the acquired data.

  • Usage

    To list all executables provided by cryoCARE, run: $ sbgrid-list cryocare Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cryocare Copy to clipboard Available operating systems: Linux 64, OS X INTEL

  • Primary Citation*

    T.-O. Buchholz, M. Jordan, G. Pigino, and F. Jug. 2019. Cryo-CARE: Content-Aware Image Restoration for Cryo-Transmission Electron Microscopy Data. 2019 IEEE 16th International Symposium on Biomedical Imaging (ISBI 2019). 502-506.

    T. O. Buchholz, A. Krull, R. Shahidi, G. Pigino, G. Jékely, and F. Jug. 2019. Content-aware image restoration for electron microscopy. Methods in Cell Biology. 152: 277-289.


    • *Full citation information available through

  • Keywords

    Electron Microscopy

  • Default Versions

    Linux 64:  0.3.0 (10.5 GB)
    OS X INTEL:  0.3.0 (1.0 GB)

  • Other Versions

      Linux 64:

      0.1.1 (3.7 GB) , 0.2.1 (10.5 GB)

    • OS X INTEL:

      0.1.1 (2.1 GB) , 0.2.1 (1.0 GB)

  • Developers

    Florian Jug, Tim-Oliver Buchholz

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