Supported Applications

ColabDesign

Description

a tool that makes protein design accessible though Jupyter notebooks using AlphaFold, TrRosetta etc.
Usage
To list all executables provided by ColabDesign, run: $ sbgrid-list colabdesign
Usage Notes

Example Jupyter notebooks can be found by following the links at https://github.com/sokrypton/ColabDesign/blob/main/README.md e.g. AFDesign example notebook can be found at https://github.com/sokrypton/ColabDesign/tree/main/af/design.ipynb
Installation
Use the following command to install this title with the CLI client: $ sbgrid-cli install colabdesign Available operating systems: Linux 64

Keywords

Protein-Protein Interaction Prediction, Protein Structure Analysis
Default Versions

Linux 64: 1.1.1 (6.1 GB)
Developers

Sergey Ovchinnikov, Christopher Frank, Shihao Feng, Justas Dauparas, Weikun Wu