Supported Applications


  • Description

    is a cell image analysis software designed to enable biologists without training in computer vision or programming to quantitatively measure phenotypes from thousands of images automatically.

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cellprofiler Copy to clipboard
  • Citation Note

    Although not required, it is requested that you cite the following url: http://cellprofiler.org/ in addition to the publications and that an email be sent to imagingadmin@broadinstitute.org to notify them of your publication
  • Keywords


  • Default Versions

    Linux 64:  3.1.5
    OS X INTEL:  3.1.5

  • Other Versions

      Linux 64:

      4.1.3, 3.1.3, 2.1.1-2
    • OS X INTEL:

      4.1.3, 3.1.3, 3.0.0
  • Developers

    Anne E Carpenter, Lee Kamentsky, Mark-Anthony Bray, Thouis Raymond Jones