Supported Applications
ARCTIC-3D
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Description
a software for data-mining and clustering of protein interface information. It allows you to retrieve all the existing interface information for your desired protein from the PDBE graph database, grouping similar interfaces in interacting surfaces.
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Usage
To list all executables provided by ARCTIC-3D, run:$ sbgrid-list arctic3d
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Installation
Use the following command to install this title with the CLI client:$ sbgrid-cli install arctic3d
Available operating systems: Linux 64, OS X INTEL -
Primary Citation*
M. Giulini, R. V. Honorato, J. L. Rivera, and A. M. Bonvin. 2024. ARCTIC-3D: automatic retrieval and clustering of interfaces in complexes from 3D structural information. Communications Biology. 7(1): 49.
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*Full citation information available through
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Keywords
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Default Versions
Linux 64:  0.5.1 (1.5 GB)
OS X INTEL:  0.5.1 (1.3 GB) -
Developers
Rodrigo Vargas Honorato, Jesus L. Rivera, Marco Giulini, Alexandre MJJ Bonvin