Search
Bluesky

SBGridTV
Button for mobile navigation
Join us

Supported Applications

AlphaFlow

  • Description

    a modified version of AlphaFold, fine-tuned with a flow matching objective, designed for generative modeling of protein conformational ensembles.

  • Usage

    To list all executables provided by AlphaFlow, run: $ sbgrid-list alphaflow Copy to clipboard

  • Usage Notes

    SBGrid curated AlphaFlow provides the callable program: python.alphaflow

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install alphaflow Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    B. Jing, B. Berger, and &. T. Jaakkola. 2024. AlphaFold Meets Flow Matching for Generating Protein Ensembles: Proceedings of the 41st International Conference on Machine Learning. Proceedings of Machine Learning Research. 235: 22277-22303.


    • *Full citation information available through

  • Citation Note

    Please cite the preprint: https://arxiv.org/abs/2402.04845

  • Keywords

    Protein Structure Analysis

  • Default Versions

    Linux 64:  20241203_86d7606 (4.1 GB)

  • Developers

    Bowen Jing, Bonnie Berger, Tommi Jaakkola

Scroll