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Supported Applications

STOPGAP

  • Description

    a subtomogram averaging workflow written in MATLAB for performing a number of subtomogram averaging tasks including template matching, high-resolution alignment and averaging, and classification.

  • Usage

    To list all executables provided by STOPGAP, run: $ sbgrid-list stopgap Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install stopgap Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    W. Wan, S. Khavnekar, and J. Wagner. 2024. STOPGAP: an open-source package for template matching, subtomogram alignment and classification. Acta crystallographica. Section D, Structural biology. 80: 336-349.


    • *Full citation information available through

  • Keywords

    Electron Microscopy, Tomography

  • Default Versions

    Linux 64:  0.7.5 (12.3 GB)

  • Other Versions

      Linux 64:

      0.7.4 (12.3 GB)

  • Developers

    William Wan

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