Search
Webinars Science Tales
Button for mobile navigation
Join us

Supported Applications

CryoLithe

  • Description

    a supervised machine learning method to directly reconstruct the tomogram from aligned cryo-ET tilt series. The methods is trained on real measurements using FBP+cryo-CARE+IsoNet reconstructions as the reference.

  • Usage

    To list all executables provided by CryoLithe, run: $ sbgrid-list cryolithe Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install cryolithe Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    V. Kishore, V. Debarnot, A. Khorashadizadeh, R. D. Righetto, B. D. Engel, and I. Dokmanić. 2025. Efficient reconstruction and denoising of cryo-ET data with end-to-end localized deep learning. arXiv. Cornell University.


    • *Full citation information available through

  • Keywords

    Tomography

  • Default Versions

    Linux 64:  a37b49e (8.2 GB)

  • Developers

    Vinith Kishore, Valentin Debarnot, Ivan Dokmanic, Benjamin D Engel, Ricardo Righetto, AmirEhsan Khorashadizadeh

Scroll