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BindCraft

  • Description

    Simple binder design pipeline using AlphaFold2 backpropagation, MPNN, and PyRosetta. Select your target and let the script do the rest of the work and finish once you have enough designs to order!

  • Usage

    To list all executables provided by BindCraft, run: $ sbgrid-list bindcraft Copy to clipboard

  • Installation

    Use the following command to install this title with the CLI client: $ sbgrid-cli install bindcraft Copy to clipboard Available operating systems: Linux 64

  • Primary Citation*

    M. Pacesa, L. Nickel, C. Schellhaas, J. Schmidt, E. Pyatova, L. Kissling, P. Barendse, J. Choudhury, S. Kapoor, A. Alcaraz-Serna, Y. Cho, K. H. Ghamary, L. Vinué, B. J. Yachnin, A. M. Wollacott, S. Buckley, A. H. Westphal, S. Lindhoud, S. Georgeon, C. A. Goverde, G. N. Hatzopoulos, P. Gönczy, Y. D. Muller, G. Schwank, D. C. Swarts, A. J. Vecchio, B. L. Schneider, S. Ovchinnikov, and B. E. Correia. 2024. BindCraft: one-shot design of functional protein binders. bioRxiv : the preprint server for biology.


    • *Full citation information available through

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