Member Publications

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54 Member Publications for June 2010

Homing in on acute graft vs. host disease: tissue-specific T regulatory and Th17 cells.
1. Curr Top Microbiol Immunol - published June 22, 2010
2. Engelhardt BG, Crowe JE Jr
Physical mechanisms of signal integration by WASP family proteins.
1. Annu Rev Biochem - published June 11, 2010
2. Padrick SB, Rosen MK
Molecular structure of WlbB, a bacterial N-acetyltransferase involved in the biosynthesis of 2,3-diacetamido-2,3-dideoxy-D-mannuronic acid .
1. Biochemistry - published June 8, 2010
2. Thoden JB, Holden HM
Proteins required for lipopolysaccharide assembly in Escherichia coli form a transenvelope complex.
1. Biochemistry - published June 8, 2010
2. Chng SS, Gronenberg LS, Kahne D
WASH and WAVE actin regulators of the Wiskott-Aldrich syndrome protein (WASP) family are controlled by analogous structurally related complexes.
1. Proc Natl Acad Sci U S A - published June 8, 2010
2. Jia D, Gomez TS, Metlagel Z, Umetani J, Otwinowski Z, Rosen MK, Billadeau DD
Peptide-MHC heterodimers show that thymic positive selection requires a more restricted set of self-peptides than negative selection.
1. J Exp Med - published June 7, 2010
2. Juang J, Ebert PJ, Feng D, Garcia KC, Krogsgaard M, Davis MM
The longin SNARE VAMP7/TI-VAMP adopts a closed conformation.
1. J Biol Chem - published June 4, 2010
2. Vivona S, Liu CW, Strop P, Rossi V, Filippini F, Brunger AT
Mass spectrometry following mild enzymatic digestion reveals phosphorylation of recombinant proteins in Escherichia coli through mechanisms involving direct nucleotide binding.
1. J Proteome Res - published June 4, 2010
2. She YM, Xu X, Yakunin AF, Dhe-Paganon S, Donald LJ, Standing KG, Lee DC, Jia Z, Cyr TD
Structural basis of multivalent binding to wheat germ agglutinin.
1. J Am Chem Soc - published June 3, 2010
2. Schwefel D, Maierhofer C, Beck JG, Seeberger S, Diederichs K, Möller HM, Welte W, Wittmann V
Iterative structure-based peptide-like inhibitor design against the botulinum neurotoxin serotype A.
1. PLoS One - published June 3, 2010
2. Zuniga JE, Hammill JT, Drory O, Nuss JE, Burnett JC, Gussio R, Wipf P, Bavari S, Brunger AT
Crystal structure of the human ubiquitin-activating enzyme 5 (UBA5) bound to ATP: mechanistic insights into a minimalistic E1 enzyme.
1. J Biol Chem - published June 2, 2010
2. Bacik JP, Walker JR, Ali M, Schimmer AD, Dhe-Paganon S
The C8-2'-deoxyguanosine adduct of 2-amino-3-methylimidazo[1,2-d]naphthalene, a carbocyclic analogue of the potent mutagen 2-amino-3-methylimidazo[4,5-f]quinoline, is a block to replication in vitro.
1. Chem Res Toxicol - published June 2, 2010
2. Christov PP, Chowdhury G, Garmendia CA, Wang F, Stover JS, Elmquist CE, Kozekova A, Angel KC, Turesky RJ, Stone MP, Guengerich FP, Rizzo CJ
Structural analysis of protein interfaces from 13C direct-detected paramagnetic relaxation enhancements.
1. J Am Chem Soc - published June 2, 2010
2. Madl T, Felli IC, Bertini I, Sattler M
Conformational selection in the recognition of the snurportin importin beta binding domain by importin beta.
1. Biochemistry - published June 2, 2010
2. Bhardwaj A, Cingolani G
Structural analysis of botulinum neurotoxin type G receptor binding .
1. Biochemistry - published June 2, 2010
2. Schmitt J, Karalewitz A, Benefield DA, Mushrush DJ, Pruitt RN, Spiller BW, Barbieri JT, Lacy DB
Structure-based drug design and optimization of mannoside bacterial FimH antagonists.
1. J Med Chem - published June 2, 2010
2. Han Z, Pinkner JS, Ford B, Obermann R, Nolan W, Wildman SA, Hobbs D, Ellenberger T, Cusumano CK, Hultgren SJ, Janetka JW
Chromophore formation in DsRed occurs by a branched pathway.
1. J Am Chem Soc - published June 2, 2010
2. Strack RL, Strongin DE, Mets L, Glick BS, Keenan RJ
Disease-associated mutations in the p150(Glued) subunit destabilize the CAP-gly domain.
1. Biochemistry - published June 2, 2010
2. Ahmed S, Sun S, Siglin AE, Polenova T, Williams JC
Comparative evaluation of 3D virtual ligand screening methods: impact of the molecular alignment on enrichment.
1. J Chem Inf Model - published June 2, 2010
2. Giganti D, Guillemain H, Spadoni JL, Nilges M, Zagury JF, Montes M
Allosteric inhibition of macrophage migration inhibitory factor revealed by ibudilast.
1. Proc Natl Acad Sci U S A - published June 2, 2010
2. Cho Y, Crichlow GV, Vermeire JJ, Leng L, Du X, Hodsdon ME, Bucala R, Cappello M, Gross M, Gaeta F, Johnson K, Lolis EJ
Pro isomerization in MLL1 PHD3-bromo cassette connects H3K4me readout to CyP33 and HDAC-mediated repression.
1. Cell - published June 2, 2010
2. Wang Z, Song J, Milne TA, Wang GG, Li H, Allis CD, Patel DJ
Structure of the Rift Valley fever virus nucleocapsid protein reveals another architecture for RNA encapsidation.
1. Proc Natl Acad Sci U S A - published June 2, 2010
2. Raymond DD, Piper ME, Gerrard SR, Smith JL
Adenomatous polyposis coli protein nucleates actin assembly and synergizes with the formin mDia1.
1. J Cell Biol - published June 2, 2010
2. Okada K, Bartolini F, Deaconescu AM, Moseley JB, Dogic Z, Grigorieff N, Gundersen GG, Goode BL
Intracellular transport: force controls motor switching at filament junctions.
1. Curr Biol - published June 2, 2010
2. Rock RS
MicroRNA biogenesis via splicing and exosome-mediated trimming in Drosophila.
1. Mol Cell - published June 2, 2010
2. Flynt AS, Greimann JC, Chung WJ, Lima CD, Lai EC
Structural insights into interferon regulatory factor activation.
1. Cell Signal - published June 1, 2010
2. Chen W, Royer WE Jr
Structural fold, conservation and Fe(II) binding of the intracellular domain of prokaryote FeoB.
1. J Struct Biol - published June 1, 2010
2. Hung KW, Chang YW, Eng ET, Chen JH, Chen YC, Sun YJ, Hsiao CD, Dong G, Spasov KA, Unger VM, Huang TH
Electrostatic interactions between arginines and the minor groove in the nucleosome.
1. J Biomol Struct Dyn - published June 1, 2010
2. West SM, Rohs R, Mann RS, Honig B
The membrane-associated protein, supervillin, accelerates F-actin-dependent rapid integrin recycling and cell motility.
1. Traffic - published June 1, 2010
2. Fang Z, Takizawa N, Wilson KA, Smith TC, Delprato A, Davidson MW, Lambright DG, Luna EJ
High-resolution x-ray structure and functional analysis of the murine norovirus 1 capsid protein protruding domain.
1. J Virol - published June 1, 2010
2. Taube S, Rubin JR, Katpally U, Smith TJ, Kendall A, Stuckey JA, Wobus CE
Biochemical characterization of the C4-dicarboxylate transporter DctA from Bacillus subtilis.
1. J Bacteriol - published June 1, 2010
2. Groeneveld M, Weme RG, Duurkens RH, Slotboom DJ
Phosphorylation of the cool-1/beta-Pix protein serves as a regulatory signal for the migration and invasive activity of Src-transformed cells.
1. J Biol Chem - published June 1, 2010
2. Feng Q, Baird D, Yoo S, Antonyak M, Cerione RA
The many twists and turns of DNA: template, telomere, tool, and target.
1. Curr Opin Struct Biol - published June 1, 2010
2. Egli M, Pallan PS
Mapping the ryanodine receptor FK506-binding protein subunit using fluorescence resonance energy transfer.
1. J Biol Chem - published June 1, 2010
2. Cornea RL, Nitu FR, Samsó M, Thomas DD, Fruen BR
Complement protein C1q forms a complex with cytotoxic prion protein oligomers.
1. J Biol Chem - published June 1, 2010
2. Erlich P, Dumestre-Pérard C, Ling WL, Lemaire-Vieille C, Schoehn G, Arlaud GJ, Thielens NM, Gagnon J, Cesbron JY
A structural classification of substrate-binding proteins.
1. FEBS Lett - published June 1, 2010
2. Berntsson RP, Smits SH, Schmitt L, Slotboom DJ, Poolman B
Structure and RNA recognition by the snRNA and snoRNA transport factor PHAX.
1. RNA - published June 1, 2010
2. Mourão A, Varrot A, Mackereth CD, Cusack S, Sattler M
Population-based incidence of human metapneumovirus infection among hospitalized children.
1. J Infect Dis - published June 1, 2010
2. Williams JV, Edwards KM, Weinberg GA, Griffin MR, Hall CB, Zhu Y, Szilagyi PG, Wang CK, Yang CF, Silva D, Ye D, Spaete RR, Crowe JE Jr
The tertiary structure of group II introns: implications for biological function and evolution.
1. Crit Rev Biochem Mol Biol - published June 1, 2010
2. Pyle AM
Insights into the importance of hydrogen bonding in the gamma-phosphate binding pocket of myosin: structural and functional studies of serine 236.
1. Biochemistry - published June 1, 2010
2. Frye JJ, Klenchin VA, Bagshaw CR, Rayment I
Structure of the tropomyosin overlap complex from chicken smooth muscle: insight into the diversity of N-terminal recognition.
1. Biochemistry - published June 1, 2010
2. Frye J, Klenchin VA, Rayment I
African-derived genetic polymorphisms in TNFAIP3 mediate risk for autoimmunity.
1. J Immunol - published June 1, 2010
2. Lodolce JP, Kolodziej LE, Rhee L, Kariuki SN, Franek BS, McGreal NM, Logsdon MF, Bartulis SJ, Perera MA, Ellis NA, Adams EJ, Hanauer SB, Jolly M, Niewold TB, Boone DL
Molecular mechanisms in signal transduction at the membrane.
1. Nat Struct Mol Biol - published June 1, 2010
2. Groves JT, Kuriyan J
Architecture of Eph receptor clusters.
1. Proc Natl Acad Sci U S A - published June 1, 2010
2. Himanen JP, Yermekbayeva L, Janes PW, Walker JR, Xu K, Atapattu L, Rajashankar KR, Mensinga A, Lackmann M, Nikolov DB, Dhe-Paganon S
Electron cryotomography.
1. Cold Spring Harb Perspect Biol - published June 1, 2010
2. Tocheva EI, Li Z, Jensen GJ
Diffraction techniques in structural biology.
1. Curr Protoc Nucleic Acid Chem - published June 1, 2010
2. Egli M
Quantifying instrument errors in macromolecular X-ray data sets.
1. Acta Crystallogr D Biol Crystallogr - published June 1, 2010
2. Diederichs K
Structural basis for Rab GTPase recognition and endosome tethering by the C2H2 zinc finger of Early Endosomal Autoantigen 1 (EEA1).
1. Proc Natl Acad Sci U S A - published June 1, 2010
2. Mishra A, Eathiraj S, Corvera S, Lambright DG
Polarizable atomic multipole x-ray refinement: hydration geometry and application to macromolecules.
1. Biophys J - published June 1, 2010
2. Fenn TD, Schnieders MJ, Brunger AT, Pande VS
Distinct oligomeric forms of the Pseudomonas aeruginosa RetS sensor domain modulate accessibility to the ligand binding site.
1. Environ Microbiol - published June 1, 2010
2. Vincent F, Round A, Reynaud A, Bordi C, Filloux A, Bourne Y
Diphthamide biosynthesis requires an organic radical generated by an iron-sulphur enzyme.
1. Nature - published June 1, 2010
2. Zhang Y, Zhu X, Torelli AT, Lee M, Dzikovski B, Koralewski RM, Wang E, Freed J, Krebs C, Ealick SE, Lin H
A probabilistic and continuous model of protein conformational space for template-free modeling.
1. J Comput Biol - published June 1, 2010
2. Zhao F, Peng J, Debartolo J, Freed KF, Sosnick TR, Xu J
Evolution of a single gene highlights the complexity underlying molecular descriptions of fitness.
1. Chaos - published June 1, 2010
2. Peña MI, Van Itallie E, Bennett MR, Shamoo Y
The Ribosome Comes Alive.
1. Isr J Chem - published June 1, 2010
2. Frank J