Member Publications

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52 Member Publications for February 2010

KCNQ1/KCNE1 assembly, co-translation not required.
1. Channels (Austin) - published February 9, 2010
2. Vanoye CG, Welch RC, Tian C, Sanders CR, George AL Jr
RNA induced polymerization of the Borna disease virus nucleoprotein.
1. Virology - published February 5, 2010
2. Hock M, Kraus I, Schoehn G, Jamin M, Andrei-Selmer C, Garten W, Weissenhorn W
Structural and biophysical studies of human PARP-1 in complex with damaged DNA.
1. J Mol Biol - published February 5, 2010
2. Lilyestrom W, van der Woerd MJ, Clark N, Luger K
Interactions of PAN's C-termini with archaeal 20S proteasome and implications for the eukaryotic proteasome-ATPase interactions.
1. EMBO J - published February 3, 2010
2. Yu Y, Smith DM, Kim HM, Rodriguez V, Goldberg AL, Cheng Y
Structure of clathrin coat with bound Hsc70 and auxilin: mechanism of Hsc70-facilitated disassembly.
1. EMBO J - published February 3, 2010
2. Xing Y, Böcking T, Wolf M, Grigorieff N, Kirchhausen T, Harrison SC
Structure of an integrin with an alphaI domain, complement receptor type 4.
1. EMBO J - published February 3, 2010
2. Xie C, Zhu J, Chen X, Mi L, Nishida N, Springer TA
Leukotriene BLT2 receptor monomers activate the G(i2) GTP-binding protein more efficiently than dimers.
1. J Biol Chem - published February 2, 2010
2. Arcemisbéhère L, Sen T, Boudier L, Balestre MN, Gaibelet G, Detouillon E, Orcel H, Mendre C, Rahmeh R, Granier S, Vivès C, Fieschi F, Damian M, Durroux T, Banères JL, Mouillac B
The ubiquitin binding region of the Smurf HECT domain facilitates polyubiquitylation and binding of ubiquitylated substrates.
1. J Biol Chem - published February 2, 2010
2. Ogunjimi AA, Wiesner S, Briant DJ, Varelas X, Sicheri F, Forman-Kay J, Wrana JL
Perforin activates clathrin- and dynamin-dependent endocytosis, which is required for plasma membrane repair and delivery of granzyme B for granzyme-mediated apoptosis.
1. Blood - published February 2, 2010
2. Thiery J, Keefe D, Saffarian S, Martinvalet D, Walch M, Boucrot E, Kirchhausen T, Lieberman J
Functional delivery of a membrane protein into oocyte membranes using bicelles.
1. Biochemistry - published February 2, 2010
2. Kang C, Vanoye CG, Welch RC, Van Horn WD, Sanders CR
Structural and functional studies of Aspergillus clavatus N(5)-carboxyaminoimidazole ribonucleotide synthetase .
1. Biochemistry - published February 2, 2010
2. Thoden JB, Holden HM, Paritala H, Firestine SM
Direct contacts between extracellular membrane-proximal domains are required for VEGF receptor activation and cell signaling.
1. Proc Natl Acad Sci U S A - published February 2, 2010
2. Yang Y, Xie P, Opatowsky Y, Schlessinger J
A versatile synthetic platform based on strained propargyl amines.
1. Angew Chem Int Ed Engl - published February 2, 2010
2. He Z, Yudin AK
Discovery of novel fibroblast growth factor receptor 1 kinase inhibitors by structure-based virtual screening.
1. J Med Chem - published February 2, 2010
2. Ravindranathan KP, Mandiyan V, Ekkati AR, Bae JH, Schlessinger J, Jorgensen WL
Role of the histone domain in the autoinhibition and activation of the Ras activator Son of Sevenless.
1. Proc Natl Acad Sci U S A - published February 2, 2010
2. Gureasko J, Kuchment O, Makino DL, Sondermann H, Bar-Sagi D, Kuriyan J
Mechanism of chromatin remodeling.
1. Proc Natl Acad Sci U S A - published February 2, 2010
2. Lorch Y, Maier-Davis B, Kornberg RD
Analysis of a beta-helical region in the p55 domain of Helicobacter pylori vacuolating toxin.
1. BMC Microbiol - published February 2, 2010
2. Ivie SE, McClain MS, Algood HM, Lacy DB, Cover TL
Unfolding simulations reveal the mechanism of extreme unfolding cooperativity in the kinetically stable alpha-lytic protease.
1. PLoS Comput Biol - published February 2, 2010
2. Salimi NL, Ho B, Agard DA
Closed loop adaptive optics for microscopy without a wavefront sensor.
1. Proc SPIE Int Soc Opt Eng - published February 2, 2010
2. Kner P, Winoto L, Agard DA, Sedat JW
Crystal structure of a trimeric archaeal adenylate kinase from the mesophile Methanococcus maripaludis with an unusually broad functional range and thermal stability.
1. Proteins - published February 1, 2010
2. Davlieva M, Shamoo Y
The impact of window functions on NMR-based paramagnetic relaxation enhancement measurements in membrane proteins.
1. Biochim Biophys Acta - published February 1, 2010
2. Van Horn WD, Beel AJ, Kang C, Sanders CR
BCL::contact-low confidence fold recognition hits boost protein contact prediction and de novo structure determination.
1. J Comput Biol - published February 1, 2010
2. Karakaş M, Woetzel N, Meiler J
Crystal structure of Mycobacterium tuberculosis LppA, a lipoprotein confined to pathogenic mycobacteria.
1. Proteins - published February 1, 2010
2. Graña M, Bellinzoni M, Bellalou J, Haouz A, Miras I, Buschiazzo A, Winter N, Alzari PM
Past, present and future of vasopressin and oxytocin receptor oligomers, prototypical GPCR models to study dimerization processes.
1. Curr Opin Pharmacol - published February 1, 2010
2. Cottet M, Albizu L, Perkovska S, Jean-Alphonse F, Rahmeh R, Orcel H, Méjean C, Granier S, Mendre C, Mouillac B, Durroux T
Organization, structure, and assembly of alpha-carboxysomes determined by electron cryotomography of intact cells.
1. J Mol Biol - published February 1, 2010
2. Iancu CV, Morris DM, Dou Z, Heinhorst S, Cannon GC, Jensen GJ
Fusion-deficient insertion mutants of herpes simplex virus type 1 glycoprotein B adopt the trimeric postfusion conformation.
1. J Virol - published February 1, 2010
2. Silverman JL, Sharma S, Cairns TM, Heldwein EE
Structural biology of S-adenosylmethionine decarboxylase.
1. Amino Acids - published February 1, 2010
2. Bale S, Ealick SE
A structural element within the HUWE1 HECT domain modulates self-ubiquitination and substrate ubiquitination activities.
1. J Biol Chem - published February 1, 2010
2. Pandya RK, Partridge JR, Love KR, Schwartz TU, Ploegh HL
Real-time NMR study of guanine nucleotide exchange and activation of RhoA by PDZ-RhoGEF.
1. J Biol Chem - published February 1, 2010
2. Gasmi-Seabrook GM, Marshall CB, Cheung M, Kim B, Wang F, Jang YJ, Mak TW, Stambolic V, Ikura M
Real-time NMR study of three small GTPases reveals that fluorescent 2'(3')-O-(N-methylanthraniloyl)-tagged nucleotides alter hydrolysis and exchange kinetics.
1. J Biol Chem - published February 1, 2010
2. Mazhab-Jafari MT, Marshall CB, Smith M, Gasmi-Seabrook GM, Stambolic V, Rottapel R, Neel BG, Ikura M
Activation of the Ran GTPase is subject to growth factor regulation and can give rise to cellular transformation.
1. J Biol Chem - published February 1, 2010
2. Ly TK, Wang J, Pereira R, Rojas KS, Peng X, Feng Q, Cerione RA, Wilson KF
Towards an atomic resolution understanding of the influenza virus replication machinery.
1. Curr Opin Struct Biol - published February 1, 2010
2. Ruigrok RW, Crépin T, Hart DJ, Cusack S
Slow folding of cross-linked alpha-helical peptides due to steric hindrance.
1. J Phys Chem B - published February 1, 2010
2. Paoli B, Pellarin R, Caflisch A
Structural basis of respiratory syncytial virus neutralization by motavizumab.
1. Nat Struct Mol Biol - published February 1, 2010
2. McLellan JS, Chen M, Kim A, Yang Y, Graham BS, Kwong PD
High-resolution wide-field microscopy with adaptive optics for spherical aberration correction and motionless focusing.
1. J Microsc - published February 1, 2010
2. Kner P, Sedat JW, Agard DA, Kam Z
Structure determination and characterization of the vitamin B6 degradative enzyme (E)-2-(acetamidomethylene)succinate hydrolase.
1. Biochemistry - published February 1, 2010
2. McCulloch KM, Mukherjee T, Begley TP, Ealick SE
Synthesis and bioconjugation of 2 and 3 nm-diameter gold nanoparticles.
1. Bioconjug Chem - published February 1, 2010
2. Ackerson CJ, Jadzinsky PD, Sexton JZ, Bushnell DA, Kornberg RD
Designed semisynthetic protein inhibitors of Ub/Ubl E1 activating enzymes.
1. J Am Chem Soc - published February 1, 2010
2. Lu X, Olsen SK, Capili AD, Cisar JS, Lima CD, Tan DS
Pseudo-merohedral twinning and noncrystallographic symmetry in orthorhombic crystals of SIVmac239 Nef core domain bound to different-length TCRzeta fragments.
1. Acta Crystallogr D Biol Crystallogr - published February 1, 2010
2. Kim WM, Sigalov AB, Stern LJ
Structure of grouper iridovirus purine nucleoside phosphorylase.
1. Acta Crystallogr D Biol Crystallogr - published February 1, 2010
2. Kang YN, Zhang Y, Allan PW, Parker WB, Ting JW, Chang CY, Ealick SE
Complexes of Thermotoga maritimaS-adenosylmethionine decarboxylase provide insights into substrate specificity.
1. Acta Crystallogr D Biol Crystallogr - published February 1, 2010
2. Bale S, Baba K, McCloskey DE, Pegg AE, Ealick SE
Efficient tumor targeting with high-affinity designed ankyrin repeat proteins: effects of affinity and molecular size.
1. Cancer Res - published February 1, 2010
2. Zahnd C, Kawe M, Stumpp MT, de Pasquale C, Tamaskovic R, Nagy-Davidescu G, Dreier B, Schibli R, Binz HK, Waibel R, Plückthun A
A conserved mechanism of autoinhibition for the AMPK kinase domain: ATP-binding site and catalytic loop refolding as a means of regulation.
1. Acta Crystallogr Sect F Struct Biol Cryst Commun - published February 1, 2010
2. Littler DR, Walker JR, Davis T, Wybenga-Groot LE, Finerty PJ Jr, Newman E, Mackenzie F, Dhe-Paganon S
Asymmetric receptor contact is required for tyrosine autophosphorylation of fibroblast growth factor receptor in living cells.
1. Proc Natl Acad Sci U S A - published February 1, 2010
2. Bae JH, Boggon TJ, Tomé F, Mandiyan V, Lax I, Schlessinger J
Tumor detection by imaging proteolytic activity.
1. Cancer Res - published February 1, 2010
2. Darragh MR, Schneider EL, Lou J, Phojanakong PJ, Farady CJ, Marks JD, Hann BC, Craik CS
AlgK is a TPR-containing protein and the periplasmic component of a novel exopolysaccharide secretin.
1. Structure - published February 1, 2010
2. Keiski CL, Harwich M, Jain S, Neculai AM, Yip P, Robinson H, Whitney JC, Riley L, Burrows LL, Ohman DE, Howell PL
Structure of the Saccharomyces cerevisiae Cet1-Ceg1 mRNA capping apparatus.
1. Structure - published February 1, 2010
2. Gu M, Rajashankar KR, Lima CD
Active site remodelling accompanies thioester bond formation in the SUMO E1.
1. Nature - published February 1, 2010
2. Olsen SK, Capili AD, Lu X, Tan DS, Lima CD
Inhibitor of DNA binding 3 limits development of murine slam-associated adaptor protein-dependent "innate" gammadelta T cells.
1. PLoS One - published February 1, 2010
2. Verykokakis M, Boos MD, Bendelac A, Adams EJ, Pereira P, Kee BL
Merlin/NF2 suppresses tumorigenesis by inhibiting the E3 ubiquitin ligase CRL4(DCAF1) in the nucleus.
1. Cell - published February 1, 2010
2. Li W, You L, Cooper J, Schiavon G, Pepe-Caprio A, Zhou L, Ishii R, Giovannini M, Hanemann CO, Long SB, Erdjument-Bromage H, Zhou P, Tempst P, Giancotti FG
Dicer-independent primal RNAs trigger RNAi and heterochromatin formation.
1. Cell - published February 1, 2010
2. Halic M, Moazed D
[A novel key element in post-meiotic male genome reprogramming].
1. Med Sci (Paris) - published February 1, 2010
2. Rousseaux S, Petosa C, Müller CW, Khochbin S