Member Publications

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48 Member Publications for November 2009

Synthesis of pyridine, pyrimidine and pyridinone C-nucleoside phosphoramidites for probing cytosine function in RNA.
1. J Org Chem - published November 6, 2009
2. Lu J, Li NS, Koo SC, Piccirilli JA
The tyrosine kinase Csk dimerizes through Its SH3 domain.
1. PLoS One - published November 4, 2009
2. Levinson NM, Visperas PR, Kuriyan J
Insights into the reactivation of cobalamin-dependent methionine synthase.
1. Proc Natl Acad Sci U S A - published November 3, 2009
2. Koutmos M, Datta S, Pattridge KA, Smith JL, Matthews RG
X-ray structure of Pur-alpha reveals a Whirly-like fold and an unusual nucleic-acid binding surface.
1. Proc Natl Acad Sci U S A - published November 3, 2009
2. Graebsch A, Roche S, Niessing D
Structure-based mechanism of ADP-ribosylation by sirtuins.
1. J Biol Chem - published November 2, 2009
2. Hawse WF, Wolberger C
Structural analysis of semi-specific oligosaccharide recognition by a cellulose-binding protein of thermotoga maritima reveals adaptations for functional diversification of the oligopeptide periplasmic binding protein fold.
1. J Biol Chem - published November 2, 2009
2. Cuneo MJ, Beese LS, Hellinga HW
Comparison of Alzheimer Abeta(1-40) and Abeta(1-42) amyloid fibrils reveals similar protofilament structures.
1. Proc Natl Acad Sci U S A - published November 2, 2009
2. Schmidt M, Sachse C, Richter W, Xu C, Fändrich M, Grigorieff N
Periplasmic domains of Pseudomonas aeruginosa PilN and PilO form a stable heterodimeric complex.
1. J Mol Biol - published November 2, 2009
2. Sampaleanu LM, Bonanno JB, Ayers M, Koo J, Tammam S, Burley SK, Almo SC, Burrows LL, Howell PL
Intramolecular regulation of phosphorylation status of the circadian clock protein KaiC.
1. PLoS One - published November 2, 2009
2. Xu Y, Mori T, Qin X, Yan H, Egli M, Johnson CH
Structures of KaiC circadian clock mutant proteins: a new phosphorylation site at T426 and mechanisms of kinase, ATPase and phosphatase.
1. PLoS One - published November 2, 2009
2. Pattanayek R, Mori T, Xu Y, Pattanayek S, Johnson CH, Egli M
Structural basis of immune evasion at the site of CD4 attachment on HIV-1 gp120.
1. Science - published November 2, 2009
2. Chen L, Kwon YD, Zhou T, Wu X, O'Dell S, Cavacini L, Hessell AJ, Pancera M, Tang M, Xu L, Yang ZY, Zhang MY, Arthos J, Burton DR, Dimitrov DS, Nabel GJ, Posner MR, Sodroski J, Wyatt R, Mascola JR, Kwong PD
Dual-axis target mapping and automated sequential acquisition of dual-axis EM tomographic data.
1. J Struct Biol - published November 1, 2009
2. Zheng SQ, Matsuda A, Braunfeld MB, Sedat JW, Agard DA
Characterization of a multimeric, eukaryotic prolyl aminopeptidase: an inducible and highly specific intracellular peptidase from the non-pathogenic fungus Talaromyces emersonii.
1. Microbiology (Reading) - published November 1, 2009
2. Mahon CS, O'Donoghue AJ, Goetz DH, Murray PG, Craik CS, Tuohy MG
Crystal structure of the in vivo-assembled Bacillus subtilis Spx/RNA polymerase alpha subunit C-terminal domain complex.
1. J Struct Biol - published November 1, 2009
2. Lamour V, Westblade LF, Campbell EA, Darst SA
Characterization of the ovarian and reproductive abnormalities in prepubertal and adult estrogen non-responsive estrogen receptor alpha knock-in (ENERKI) mice.
1. Steroids - published November 1, 2009
2. Sinkevicius KW, Woloszyn K, Laine M, Jackson KS, Greene GL, Woodruff TK, Burdette JE
Monitoring enzyme catalysis in the multimeric state: direct observation of Arthrobacter 4-hydroxybenzoyl-coenzyme A thioesterase catalytic complexes using time-resolved electrospray ionization mass spectrometry.
1. Anal Biochem - published November 1, 2009
2. Li Z, Song F, Zhuang Z, Dunaway-Mariano D, Anderson KS
Target cell type-dependent modulation of human immunodeficiency virus type 1 capsid disassembly by cyclophilin A.
1. J Virol - published November 1, 2009
2. Li Y, Kar AK, Sodroski J
Mechanism of human immunodeficiency virus type 1 resistance to monoclonal antibody B12 that effectively targets the site of CD4 attachment.
1. J Virol - published November 1, 2009
2. Wu X, Zhou T, O'Dell S, Wyatt RT, Kwong PD, Mascola JR
Human immunodeficiency virus type 1 protease-correlated cleavage site mutations enhance inhibitor resistance.
1. J Virol - published November 1, 2009
2. Kolli M, Stawiski E, Chappey C, Schiffer CA
Formation of She2p tetramers is required for mRNA binding, mRNP assembly, and localization.
1. RNA - published November 1, 2009
2. Müller M, Richter K, Heuck A, Kremmer E, Buchner J, Jansen RP, Niessing D
Mechanism-based tuning of a LOV domain photoreceptor.
1. Nat Chem Biol - published November 1, 2009
2. Zoltowski BD, Vaccaro B, Crane BR
Analysis of the cytoplasmic interaction between polycystin-1 and polycystin-2.
1. Am J Physiol Renal Physiol - published November 1, 2009
2. Casuscelli J, Schmidt S, DeGray B, Petri ET, Celić A, Folta-Stogniew E, Ehrlich BE, Boggon TJ
Crystallographic definition of the epitope promiscuity of the broadly neutralizing anti-human immunodeficiency virus type 1 antibody 2F5: vaccine design implications.
1. J Virol - published November 1, 2009
2. Bryson S, Julien JP, Hynes RC, Pai EF
Molecular interplay between the replicative helicase DnaC and its loader protein DnaI from Geobacillus kaustophilus.
1. J Mol Biol - published November 1, 2009
2. Tsai KL, Lo YH, Sun YJ, Hsiao CD
Interactions of plakoglobin and beta-catenin with desmosomal cadherins: basis of selective exclusion of alpha- and beta-catenin from desmosomes.
1. J Biol Chem - published November 1, 2009
2. Choi HJ, Gross JC, Pokutta S, Weis WI
One-plasmid tunable coexpression for mycobacterial protein-protein interaction studies.
1. Protein Sci - published November 1, 2009
2. Chang Y, Mead D, Dhodda V, Brumm P, Fox BG
High resolution NMR-based model for the structure of a scFv-IL-1beta complex: potential for NMR as a key tool in therapeutic antibody design and development.
1. J Biol Chem - published November 1, 2009
2. Wilkinson IC, Hall CJ, Veverka V, Shi JY, Muskett FW, Stephens PE, Taylor RJ, Henry AJ, Carr MD
Functional and biochemical analysis of a key series of ramoplanin analogues.
1. Bioorg Med Chem Lett - published November 1, 2009
2. Fang X, Nam J, Shin D, Rew Y, Boger DL, Walker S
Design and development of masked therapeutic antibodies to limit off-target effects: application to anti-EGFR antibodies.
1. Cancer Biol Ther - published November 1, 2009
2. Donaldson JM, Kari C, Fragoso RC, Rodeck U, Williams JC
Ring1B contains a ubiquitin-like docking module for interaction with Cbx proteins.
1. Biochemistry - published November 1, 2009
2. Bezsonova I, Walker JR, Bacik JP, Duan S, Dhe-Paganon S, Arrowsmith CH
Structural insights into RNA processing by the human RISC-loading complex.
1. Nat Struct Mol Biol - published November 1, 2009
2. Wang HW, Noland C, Siridechadilok B, Taylor DW, Ma E, Felderer K, Doudna JA, Nogales E
Structural perturbations induced by the alpha-anomer of the aflatoxin B(1) formamidopyrimidine adduct in duplex and single-strand DNA.
1. J Am Chem Soc - published November 1, 2009
2. Brown KL, Voehler MW, Magee SM, Harris CM, Harris TM, Stone MP
Polyketide decarboxylative chain termination preceded by o-sulfonation in curacin a biosynthesis.
1. J Am Chem Soc - published November 1, 2009
2. Gu L, Wang B, Kulkarni A, Gehret JJ, Lloyd KR, Gerwick L, Gerwick WH, Wipf P, Håkansson K, Smith JL, Sherman DH
Crystal structure of TNFalpha complexed with a poxvirus MHC-related TNF binding protein.
1. Nat Struct Mol Biol - published November 1, 2009
2. Yang Z, West AP Jr, Bjorkman PJ
Imaging endocytic clathrin structures in living cells.
1. Trends Cell Biol - published November 1, 2009
2. Kirchhausen T
An antibody-recruiting small molecule that targets HIV gp120.
1. J Am Chem Soc - published November 1, 2009
2. Parker CG, Domaoal RA, Anderson KS, Spiegel DA
A decade of user operation on the macromolecular crystallography MAD beamline ID14-4 at the ESRF.
1. J Synchrotron Radiat - published November 1, 2009
2. McCarthy AA, Brockhauser S, Nurizzo D, Theveneau P, Mairs T, Spruce D, Guijarro M, Lesourd M, Ravelli RB, McSweeney S
Bacterial adhesion--a source of alternate antibiotic targets.
1. IDrugs - published November 1, 2009
2. Cusumano CK, Hultgren SJ
Molecular architecture of the Nup84-Nup145C-Sec13 edge element in the nuclear pore complex lattice.
1. Nat Struct Mol Biol - published November 1, 2009
2. Brohawn SG, Schwartz TU
Amphoteric amino aldehydes reroute the aza-Michael reaction.
1. J Am Chem Soc - published November 1, 2009
2. Hili R, Yudin AK
Structure-function insights into the yeast Dam1 kinetochore complex.
1. J Cell Sci - published November 1, 2009
2. Nogales E, Ramey VH
Direct inhibition of the NOTCH transcription factor complex.
1. Nature - published November 1, 2009
2. Moellering RE, Cornejo M, Davis TN, Del Bianco C, Aster JC, Blacklow SC, Kung AL, Gilliland DG, Verdine GL, Bradner JE
Ligand migration and cavities within Scapharca Dimeric HbI: studies by time-resolved crystallo-graphy, Xe binding, and computational analysis.
1. Structure - published November 1, 2009
2. Knapp JE, Pahl R, Cohen J, Nichols JC, Schulten K, Gibson QH, Srajer V, Royer WE Jr
A structural explanation for the antithrombotic activity of ARC1172, a DNA aptamer that binds von Willebrand factor domain A1.
1. Structure - published November 1, 2009
2. Huang RH, Fremont DH, Diener JL, Schaub RG, Sadler JE
Preparation of stable single-chain trimers engineered with peptide, beta2 microglobulin, and MHC heavy chain.
1. Curr Protoc Immunol - published November 1, 2009
2. Hansen T, Yu YY, Fremont DH
Differential base stacking interactions induced by trimethylene interstrand DNA cross-links in the 5'-CpG-3' and 5'-GpC-3' sequence contexts.
1. Chem Res Toxicol - published November 1, 2009
2. Huang H, Dooley PA, Harris CM, Harris TM, Stone MP
New mouse lines for the analysis of neuronal morphology using CreER(T)/loxP-directed sparse labeling.
1. PLoS One - published November 1, 2009
2. Badea TC, Hua ZL, Smallwood PM, Williams J, Rotolo T, Ye X, Nathans J
Membrane expansion alleviates endoplasmic reticulum stress independently of the unfolded protein response.
1. J Cell Biol - published November 1, 2009
2. Schuck S, Prinz WA, Thorn KS, Voss C, Walter P