new-workstation-setup

I have CentOS 7 installed working to get SBGrid working on it.

Everything went smoothly except ncurses.i686 did not install.

[user@biocvh-00754l programs]$ ls

i386-linux l m sbgrid.shrc x

i386-mac labcshrc sbgrid.cshrc share x86_64-linux

[user@biocvh-00754l programs]$ ./sbgrid.shrc

     Software Support by SBGrid (www.sbgrid.org)

Your use of the applications contained in the /programs directory constitutes

acceptance of the terms of the SBGrid License Agreement included in the file

/programs/share/LICENSE. The applications distributed by SBGrid are licensed

exclusively to member laboratories of the SBGrid Consortium.

/programs/x86_64-linux/dials/dev-496/dials-dev-496/build/setpaths.sh: line 22: libtbx.find_in_repositories: command not found

/programs/x86_64-linux/dials/dev-496/dials-dev-496/build/setpaths.sh: line 22: source: filename argument required

source: usage: source filename [arguments]

/programs/x86_64-linux/dials/dev-496/dials-dev-496/build/setpaths.sh: line 35: libtbx.path_utility: command not found

/programs/x86_64-linux/phenix/1.10-2155/phenix-1.10-2155/build/setpaths.sh: line 9: dirname: No such file or directory

/programs/x86_64-linux/phenix/1.10-2155/phenix-1.10-2155/build/setpaths.sh: line 30: libtbx.path_utility: command not found

/programs/share/bin/sbgrid-update-check: line 15: basename: command not found

/programs/share/bin/sbgrid-update-check: line 77: date: command not found

SBGrid was developed with support from its members, Harvard Medical School,

HHMI, and NSF. If use of SBGrid compiled software was an important element

in your publication, please include the following reference in your work:

Software used in the project was installed and configured by SBGrid.

cite: eLife 2013;2:e01456, Collaboration gets the most out of software.

SBGrid installation last updated: 2016-02-03 .

Please submit bug reports and help requests to:

https://sbgrid.org/help or bugs@sbgrid.org

./sbgrid.shrc: line 284: date: command not found

[user@biocvh-00754l programs]$ coot

bash: coot: command not found…

[user@biocvh-00754l programs]$ date

Fri Feb 12 11:46:19 CST 2016

[user@biocvh-00754l programs]$

I can start the process but it seems to not see other commands like data that are installed and working on the system.