Using the SBGrid Environment
Support for Site Administrators
Support for Developers
Hardware Support Notes
Thanks for attending the 2017 RELION workshop at SBGrid / HMS. Here you can find slides, notes and datasets from the workshop.
Introduction to Linux slides as PDF
Intro Handout: RELION_Workshop-Intro_handout.pdf
Hardware Handout : RELION_Workshop-Hardware_handout.pdf
Hardware Handout2 : RELION_Workshop-Hardware2_handout.pdf
Notes : relion_workshop_201703.pdf
Supplementary notes : supplementary_notes_201703.pdf
Data (~4Gb): workshop.tar.gz
Workshop pipeline : workshop_pipeline.tar.gz
We will be using RELION and Chimera during the workshop, primarily in Amazon EC2. To access these, you will need a modern web browser and access to WiFi.
You may also want intall these applications on your laptop or desktop. SBGrid builds on CentOS 6, though these applications should work on any modern Linux distro.
For Mac, we support 10.9 and higher. Keep in mind that many of the tools we are using are only available for linux.
First, set up an account by registering here : SBGrid registration
For Mac, install RELION and Chimera.
For Linux, Install RELION, Chimera, GCTF, CTF, and CUDA.
Last edited by Jason Key, 2017-03-28 02:38:43