1efc864ca7f397e7562b3643de0c81c25ed58042
bch3-kirchhausen.md
| ... | ... | @@ -18,7 +18,7 @@ New lab members should contact [help@sbgrid.org](mailto:help@sbgrid.org) to comp |
| 18 | 18 | |
| 19 | 19 | # Cluster |
| 20 | 20 | |
| 21 | -A new CPU and GPU cluster is being provisioned. Lab members can submit jobs from any Linux workstation in the lab. Current job submitions can be provisioned to either the tk-cpu or tk-gpu job queues. |
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| 21 | +A new CPU and GPU cluster is being provisioned. Lab members can submit jobs from any Linux workstation in the lab. Current job submitions can be provisioned to the tk-cpu job queue. |
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| 22 | 22 | |
| 23 | 23 | # Linux Systems |
| 24 | 24 | |
| ... | ... | @@ -26,12 +26,12 @@ All Lab linux systems are located across lab space in WAB. The Older HPC systems |
| 26 | 26 | |
| 27 | 27 | # Linux Systems mount points |
| 28 | 28 | |
| 29 | -- LLSM project folders - /tkstorage/data |
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| 30 | -- LLSM project folders - /tkstorage/data1expansion |
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| 31 | -- User home folders - /tkstorage/home |
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| 32 | -- SBGrid Project use - /tkstorage/sbgrid-share |
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| 33 | -- Cluster SSD scratch Server - /scratch |
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| 34 | -- Cluster NVME scratch storage - /vscratch |
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| 29 | +- LLSM project folders - /nfs/data1expansion |
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| 30 | +- LLSM project folders - /nfs/tkdata2 |
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| 31 | +- User home folders - /nfs/tkhome |
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| 32 | +- SBGrid Project use - /nfs/sbgrid |
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| 33 | +- Cluster SSD scratch Server - /scratch or /nfs/scratch |
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| 34 | +- Cluster NVME scratch storage - /scratch2 or /nfs/scratch2 |
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| 35 | 35 | |
| 36 | 36 | # Connecting To Linux |
| 37 | 37 | |
| ... | ... | @@ -48,12 +48,8 @@ Also see: |
| 48 | 48 | * [faq-remote](faq-remote) |
| 49 | 49 | |
| 50 | 50 | # Submitting Job to Cluster |
| 51 | -sbatch scripts and interactive srun command are available on all lab Linux workstations. |
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| 52 | - |
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| 53 | -From your linux account you can vrowse to the following folder to see some test scripts. |
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| 54 | -* /tkstorage/sbgrid-share/lab-cluster-101 |
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| 55 | 51 | |
| 56 | -Look over the README.md file and test your first job. |
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| 52 | +sbatch scripts and interactive srun command are available on all lab Linux workstations. |
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| 57 | 53 | |
| 58 | 54 | # Data Storage |
| 59 | 55 |